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Bruce S. Hudson List of Publications

    , 180. Hudson, B. S., Braden, D. A., Allis, D. G., Jenkins, T., BaronovS., Middleton, C. T., Withnall, R.and Brown, C. M., “The crystalline enol of 1,3-

    cyclohexanedione and its complex with benzene: vibrational spectra,

    simulation of structure and dynamics and evidence for cooperative hydrogen

    bonding”, submitted, April 2004.

    179. Damian G. Allis, Mark Kosmowski, and Bruce S. Hudson, “The Inelastic

    Neutron Scattering Spectrum of HB:NH and the Reproduction of Its Solid-33

    State Features by Periodic DFT”, submitted, April 2004.

    178. Allis, D. G.; Hudson, B. S., “Inelastic neutron scattering spectra of pagodane:

    experiment and DFT calculations”, Chem. Phys. Lett. (2004) 386 (4-6), 356-


    177. Allis, D. G.; Hudson, B. S.. “Inelastic neutron scattering spectra of NaBH and 4

    KBH: reproduction of anion mode shifts via periodic DFT”, Chem. Phys. Lett. 4

    (2004), 385(3,4), 166-172.

    176. Alexander, J. S.; Allis, D. G.; Hudson, Bruce S.; Ruhlandt-Senge, K., “An

    Examination of Metal-Ligand Binding Modes in Rubidium Diphenylmethanide”

    J. Am. Chem. Soc. (2003), 125(49), 15002-15003.

    175. M. R. Johnson, K. Parlinski, I. Natkaniec and B. S. Hudson, “Ab initio

    calculations and INS measurements of phonons and molecular vibrations in a

    model peptide compound urea”, Chem. Phys. 291, 53-60 (2003).

    174. Andrew C. Paoletti, Michael F. Shubsda, Bruce S. Hudson and Philip N.

    Borer, “Affinities of the Nucleocapsid Protein for Variants of SL3 RNA in HIV-

    1”, Biochemistry 41, 15423-15428 (2002).

    173. M. F. Shubsda, A. C. Paoletti, B. S. Hudson, P. N. Borer, “Affinities of

    Packaging Domain Loops in HIV-1 RNA for the Nucleocapsid Protein”,

    Biochemistry 41, 5276-5282 (2002).

    172. J. Tomkinson, S. F. Parker, D. A. Braden, B. S. Hudson, "Inelastic neutron

    scattering spectra of the transverse acoustic modes of the normal alkanes",

    Phys. Chem. Chem. Phys. 4, 716-721 (2002).

    171. Bruce S. Hudson, "Inelastic Neutron Scattering: A Tool in Molecular

    Vibrational Spectroscopy and a Test of Ab Initio Methods", J. Phys. Chem A

    105 (16), 3949-3960 (2001).

    170. Deepak Singh, Bruce S. Hudson, Chris Middleton and Robert R. Birge,

    "Conformation and Orientation of the Retinyl Chromophore in Rhodopsin: A

    Critical Evaluation of Recent NMR Data on the Basis of the Theoretical

    Calculations Results in a Refined Picture Consistent with all Experimental

    Data", Biochemistry, 40(14), 4201-4204 (2001).

169. Bruce S. Hudson, "Oriented n-alkanes in urea-d4 inclusion complexes for

    inelastic neutron scattering vibrational studies", Mol. Cryst. Liq. Cryst., 356,

    423-432 (2001).

    168. Bruce S. Hudson, John Tse, Marek Z. Zgierski, Stewart Parker, Dale A.

    Braden and Chris Middleton, "The inelastic incoherent neutron spectrum of

    crystalline oxamide", Chem. Phys. 261 (1/2), 249-260 (2000).

    167. Xiang Niu, Lakshmi Gopal, Michael P. Masingale, Dale A. Braden, Bruce S.

    Hudson, and Michael B. Sponsler, "Experimental and Theoretical

    Investigation of cis-trans Alkene Isomerization in [(Cy3P)2Cl2Ru]2(µ-

    CHCH=CHCH) and Related Vinylalkylidenes", Organometallics 2000, 19,


    166. Dale A. Braden and Bruce S. Hudson, "C6F6 and sym-C6F3H3: Ab initio and

    DFT studies of structure, vibrations and inelastic neutron scattering spectra",

    J. Phys. Chem. 104, 982-989 (2000).

    165. Gregory P. Harhay and Bruce S. Hudson, "The effect of correlation of

    inhomogeneous environmental shifts on Raman depolarization ratios for

    nearly degenerate excited states", J. Phys. Chem. 104, 681-684 (2000).

    164. Bruce S. Hudson, Dale A. Braden, Stewart F. Parker and Horst Prinzbach,

    "The vibrational inelastic neutron scattering spectrum of dodecahedrane:

    experiment and DFT simulation", Angew. Chem. Int. Ed. 39, 514-516 (2000)

    [Angew. Chemie. 112, 524-526 (2000)].

    163. Stewart F. Parker, John Tomkinson, Dale A. Braden and Bruce S. Hudson,,

    "Experimental test of the validity of the use of the n-alkanes as model

    compounds for polyethylene", Chem. Commun. 2000, 165-166.

    162. D. A. Braden, S. F. Parker, J. Tomkinson and B. S. Hudson, "Inelastic

    Neutron Scattering Spectra of the Longitudinal Acoustic Modes of the Normal

    Alkanes from Pentane to Pentacosane", J. Chem. Phys. 111, 429 (1999).

    161. Bruce S. Hudson, Joseph M. Huston and Gerardo Soto-Campos, "A

    Reversible "Dark State" Mechanism for Complexity of the Fluorescence of

    Tryptophan in Proteins", J. Phys. Chem. A 103, 2227-2234 (1999).

    160. Bruce S. Hudson and Robert R. Birge, "Angular orientation of the retinyl

    chromophore of bacteriorhodopsin: reconciliation of 2H NMR and optical

    measurements", J. Phys. Chem. A 103, 2274-2281 (1999).

    159. Robert R. Birge, Marek Z. Zgierski, Luis Serrano-Andres and Bruce S.

    Hudson, "The Transition Dipole Orientation of Linear Polyenes: Semi-

    Empirical Models and Extrapolation to the Infinite Chain Limit", J. Phys.

    Chem. A 103, 2251-2273 (1999).

    158. Bruce S. Hudson, "An Ionization/Recombination Mechanism for the

    Complexity of the Fluorescence of Tryptophan in Proteins", Acct. Chem. Res.

    32, 297-300 (1999).

    157. Stewart F. Parker, Dale A. Braden, John. Tomkinson and Bruce S. Hudson,

    "Full Longitudinal Acoustic Mode (LAM) Spectrum of an n-Alkane:

    Comparison of Observed and Computed Incoherent Inelastic Neutron

    Scattering Spectrum of n-Octadecane", J. Phys. Chem. B 102, 5955-5956


    156. Bruce S. Hudson and Laura M. Markham, "Resonance Raman Spectroscopy

    as a Test of Ab Initio Methods for the Computation of Molecular Potential

    Energy Surfaces", J. Raman Spectroscopy 29, 489-500 (1998).

    155. Jae-seok Ryu and Bruce S. Hudson, "Absorption Spectra due to Curve-

    Crossing Potentials: Time-Dependent Wavepacket Calculations", J. Korean

    Phys. Soc. 31, 299-304 (1997).

    154. Jae-seok Ryu and Bruce S. Hudson, "Absorption Spectra of a Cosine

    Potential in an Excited State: Time-Dependent Wavepacket Calculations", J.

    Korean Phys. Soc. 31, 293-298 (1997).

    153. Jae-seok Ryu and Bruce S. Hudson, "Electronic Spectrum of Ethylene from 6

    to 9 eV: New Insights from Wavepacket Dynamics Calculations", J. Korean

    Phys. Soc. 31, 282-292 (1997).

    152. Horst B. Lueck, Bruce S. Hudson, D. M. Friedrich and M. Z. Zgierski,

    "Resonance Raman Studies of Benzene Derivatives with Methoxy

    Substitution: Conformational Symmetry Breaking Effects", J. Raman

    Spectroscopy 28, 455-458 (1997).

    151. Mary S. C. Foley, Dale A. Braden, Bruce S. Hudson and Marek Z. Zgierski,

    "Resonance Raman studies of hexafluoro-1,3-butadiene", J. Phys. Chem.

    101, 1455-1459 (1997).

    150. Horst B. Lueck, Tim C. Swinney, Bruce S. Hudson and Donald M. Friedrich,

    "Resonance Raman studies of benzene derivatives with strong conjugation:

    Nitrile Substitution", Chem. Phys. Lett. 258, 80-86 (1996).

    149. Marc Van Gilst and Bruce S. Hudson, "Histidine- Tryptophan Interactions in

    T4 Lysozyme: 'Anomalous' pH Dependence of Fluorescence", Biophysical

    Chemistry 63, 17-25 (1996).

    148. Laura M. Markham and Bruce S. Hudson, "Ab Initio Analysis of the Effects of

    Aqueous Solvation on the Resonance Raman Intensities of N-

    Methylacetamide", J. Phys. Chem. 100, 2731-2737 (1996).

    147. Bruce S. Hudson, "Vibronic spectroscopy of simple peptides: resonance

    Raman studies of solvation effects", SPIE Vol 2524 (National Science

    Foundation (NSF) Forum on Optical Science and Engineering) 114-124


    146. Horst Lueck, Bruce S. Hudson and Marek Z. Zgierski, "Resonance Raman

    studies of Benzene Derivatives with Strong Conjugation", SPIE Vol 2548

    (Laser Techniques for State-Selected and State-to-State Chemistry III), 372-

    380 (1995).

    145. Bruce S. Hudson, Mary S. C. Foley, John P. Chan and Marek Z. Zgierski,

    "Resonance Raman studies of simple fluorinated compounds:

    trifluoromethyliodide and hexafluorobutadiene", SPIE Vol 2548 (Laser

    Techniques for State-Selected and State-to-State Chemistry III), 249-256


    144. Jae-seok Ryu and Bruce S. Hudson, "A new interpretation of the electronic

    spectrum of ethylene from 6-8 eV", Chem. Phys. Lett. 245, 448-